| # | Document title | Authors | Year | Source | Cited by |
| 1 | Graphene based aptasensor for glycated albumin in diabetes mellitus diagnosis and monitoring | Apiwat C., Luksirikul P., Kankla P., Pongprayoon P., Treerattrakoon K., Paiboonsukwong K., Fucharoen S., Dharakul T., Dharakul T., Japrung D. | 2016 | Biosensors and Bioelectronics
82,pp. 140-145 | 87 |
| 2 | Exploring how structural and dynamic properties of bovine and canine serum albumins differ from human serum albumin | Ketrat S., Japrung D., Pongprayoon P. | 2020 | Journal of Molecular Graphics and Modelling
98 | 79 |
| 3 | Simulations of anion transport through OprP reveal the molecular basis for high affinity and selectivity for phosphate | Pongprayoon P., Beckstein O., Wee C.L., Sansom M.S.P. | 2009 | Proceedings of the National Academy of Sciences of the United States of America
106(51),pp. 21614-21618 | 57 |
| 4 | Probing the binding site characteristics of HSA: A combined molecular dynamics and cheminformatics investigation | Pongprayoon P., Gleeson M. | 2014 | Journal of Molecular Graphics and Modelling
54,pp. 164-173 | 24 |
| 5 | Understanding the effects of two bound glucose in Sudlow site I on structure and function of human serum albumin: theoretical studies | Awang T., Wiriyatanakorn N., Saparpakorn P., Japrung D., Pongprayoon P. | 2017 | Journal of Biomolecular Structure and Dynamics
35(4),pp. 781-790 | 23 |
| 6 | Biomimetic design of a brush-like nanopore: Simulation studies | Pongprayoon P., Pongprayoon P., Beckstein O., Beckstein O., Sansom M.S.P. | 2012 | Journal of Physical Chemistry B
116(1),pp. 462-468 | 20 |
| 7 | The critical role of dimer formation in monosaccharides binding to human serum albumin | Pongprayoon P., Mori T., Mori T. | 2018 | Physical Chemistry Chemical Physics
20(5),pp. 3249-3257 | 19 |
| 8 | Sensitive detection of albuminuria by graphene oxide-mediated fluorescence quenching aptasensor | Chawjiraphan W., Apiwat C., Apiwat C., Segkhoonthod K., Treerattrakoon K., Pinpradup P., Sathirapongsasuti N., Pongprayoon P., Luksirikul P., Isarankura-Na-Ayudhya P., Japrung D. | 2020 | Spectrochimica Acta - Part A: Molecular and Biomolecular Spectroscopy
231 | 19 |
| 9 | Structural insights into betaine aldehyde dehydrogenase (BADH2) from Oryza sativa explored by modeling and simulations | Baicharoen A., Vijayan R., Pongprayoon P. | 2018 | Scientific Reports
8(1) | 18 |
| 10 | Exploring the interactions of a DNA aptamer with human serum albumins: simulation studies | Panman W., Japrung D., Pongprayoon P. | 2017 | Journal of Biomolecular Structure and Dynamics
35(11),pp. 2328-2336 | 17 |
| 11 | How human serum albumin-selective DNA aptamer binds to bovine and canine serum albumins | Kuntip N., Japrung D., Pongprayoon P. | 2021 | Biopolymers
| 15 |
| 12 | The adsorption of glycated human serum albumin-selective aptamer onto a graphene sheet: simulation studies | Awang T., Thangsan P., Luksirikul P., Japrung D., Pongprayoon P. | 2019 | Molecular Simulation
45(10),pp. 841-848 | 13 |
| 13 | The adsorption of human defensin 5 on bacterial membranes: simulation studies | Awang T., Pongprayoon P. | 2018 | Journal of Molecular Modeling
24(10) | 12 |
| 14 | Revealing the Effects of Pore Size and Geometry on the Mechanical Properties of Graphene Nanopore Using the Atomistic Finite Element Method | Pongprayoon P., Chaimanatsakun A. | 2019 | Acta Mechanica Solida Sinica
32(1),pp. 81-92 | 11 |
| 15 | Albuminuria detection using graphene oxide-mediated fluorescence quenching aptasensor | Chawjiraphan W., Apiwat C., Apiwat C., Segkhoonthod K., Treerattrakoon K., Treerattrakoon K., Pinpradup P., Sathirapongsasuti N., Pongprayoon P., Luksirikul P., Isarankura-Na-Ayudhya P., Japrung D. | 2020 | MethodsX
7 | 10 |
| 16 | Dynamics of human defensin 5 (HD5) self-assembly in solution: Molecular simulations/insights | Chairatana P., Niramitranon J., Pongprayoon P. | 2019 | Computational Biology and Chemistry
83 | 10 |
| 17 | Exploring the binding modes of cordycepin to human adenosine deaminase 1 (ADA1) compared to adenosine and 2’-deoxyadenosine | Niramitranon J., Pongprayoon P. | 2020 | Journal of Molecular Modeling
26(2) | 10 |
| 18 | The penetration of human defensin 5 (HD5) through bacterial outer membrane: simulation studies | Awang T., Pongprayoon P. | 2021 | Journal of Molecular Modeling
27(10) | 10 |
| 19 | Why do the outer membrane proteins OmpF from E. coli and OprP from P. aeruginosa prefer trimer? Simulation studies | Niramitranon J., Sansom M.S., Pongprayoon P. | 2016 | Journal of Molecular Graphics and Modelling
65,pp. 1-7 | 9 |
| 20 | Structural and Dynamic Alteration of Glycated Human Serum Albumin in Schiff Base and Amadori Adducts: A Molecular Simulation Study | Sittiwanichai S., Japrung D., Mori T., Pongprayoon P. | 2023 | Journal of Physical Chemistry B
127(23),pp. 5230-5240 | 9 |
| 21 | Dynamic and structural insights into tick serpin from Ixodes ricinus | Pongprayoon P., Niramitranon J., Kaewhom P., Kaewmongkol S., Suwan E., Stich R.W., Jittapalapong S. | 2020 | Journal of Biomolecular Structure and Dynamics
38(8),pp. 2296-2303 | 6 |
| 22 | Modeling the Adsorption of the miR-29a Cancer Biomarker on a Graphene Quantum Dot | Kuntip N., Japrung D., Pongprayoon P. | 2021 | ACS Omega
| 6 |
| 23 | What Happens When a Complementary DNA Meets miR-29a Cancer Biomarker in Complex with a Graphene Quantum Dot | Kuntip N., Japrung D., Pongprayoon P. | 2021 | ACS Applied Bio Materials
| 6 |
| 24 | Revealing the structural dynamics of feline serum albumin | Pongprayoon P., Japrung D. | 2020 | Structural Chemistry
| 6 |
| 25 | Investigating the binding affinities of fructose and galactose to human serum albumin: simulation studies | Awang T., Niramitranon J., Japrung D., Saparpakorn P., Pongprayoon P. | 2021 | Molecular Simulation
| 5 |
| 26 | Evaluation of the binding mechanism of human defensin 5 in a bacterial membrane: A simulation study | Awang T., Chairatana P., Vijayan R., Pongprayoon P. | 2021 | International Journal of Molecular Sciences
22(22) | 5 |
| 27 | Probing the binding affinities of imipenem and ertapenem for outer membrane carboxylate channel D1 (OccD1) from P. aeruginosa: simulation studies | Somboon K., Niramitranon J., Pongprayoon P. | 2017 | Journal of Molecular Modeling
23(8) | 5 |
| 28 | Observing How Glutathione and S-Hexyl Glutathione Bind to Glutathione S-Transferase from Rhipicephalus (Boophilus) microplus | Rangubpit W., Suwan E., Sangthong D., Wongpanit K., Stich R.W., Pongprayoon P., Jittapalapong S. | 2022 | International Journal of Molecular Sciences
23(21) | 5 |
| 29 | Exploring the structural and dynamic differences between human carnosinase I (CN1) and II (CN2) | Tancharoen C., Tovivek B., Niramitranon J., Kityakarn S., Luksirikul P., Gorinstein S., Pongprayoon P. | 2023 | Proteins: Structure, Function and Bioinformatics
| 4 |
| 30 | How do the protonation states of E296 and D312 in OmpF and D299 and D315 in homologous OmpC affect protein structure and dynamics? Simulation studies | Pongprayoon P. | 2014 | Computational Biology and Chemistry
53(PB),pp. 226-234 | 4 |
| 31 | The binding of apo and glucose-bound human serum albumins to a free graphene sheet in aqueous environment: Simulation studies | Sittiwanichai S., Japrung D., Pongprayoon P. | 2022 | Journal of Molecular Graphics and Modelling
110 | 4 |
| 32 | Structural dynamics of Rhipicephalus microplus serpin-3 | Pongprayoon P., Kaewhom P., Kaewmongkol S., Suwan E., Stich R.W., Wiriya B., Jittapalapong S. | 2021 | Molecular Simulation
| 4 |
| 33 | The aggregation of multiple miR-29a cancer biomarkers induced by graphene quantum dots: Molecular dynamics simulations | Natmai S., Kuntip N., Japrung D., Pongprayoon P. | 2022 | Journal of Molecular Graphics and Modelling
116 | 3 |
| 34 | Multiscale simulation studies of geometrical effects on solution transport through nanopores | Chaimanatsakun A., Japrung D., Pongprayoon P. | 2018 | Molecular Simulation
44(1),pp. 12-20 | 3 |
| 35 | Effects of Boric Acid and Storage Temperature on the Analysis of Microalbumin Using Aptasensor-Based Fluorescent Detection | Sompark C., Sompark C., Chawjiraphan W., Sukmak M., Sukmak M., Cha’on U., Cha’on U., Anutrakulchai S., Anutrakulchai S., Pongprayoon P., Putnin T., Pimalai D., Pinrod V., Japrung D. | 2022 | Biosensors
12(11) | 3 |
| 36 | Dynamic and structural properties of porcine serum albumins | Niramitranon J., Japrung D., Boonmee A., Koonawootrittriron S., Suwanasopee T., Jattawa D., Pongprayoon P. | 2023 | Molecular Simulation
| 3 |
| 37 | Binding of Apo and Glycated Human Serum Albumins to an Albumin-Selective Aptamer-Bound Graphene Quantum Dot Complex | Sittiwanichai S., Niramitranon J., Japrung D., Pongprayoon P. | 2023 | ACS Omega
8(24),pp. 21862-21870 | 3 |
| 38 | Binding Modes of Carnostatine, Homocarnosine, and Ophidine to Human Carnosinase 1 | Toviwek B., Suwanasopee T., Koonawootrittriron S., Jattawa D., Pongprayoon P. | 2023 | ACS Omega
| 2 |
| 39 | Elucidating structure and dynamics of glutathione S-transferase from Rhipicephalus (Boophilus) microplus | Rangubpit W., Suwan E., Sangthong D., Wongpanit K., Stich R.W., Pongprayoon P., Jittapalapong S. | 2022 | Journal of Biomolecular Structure and Dynamics
| 2 |
| 40 | Aggregation of Apo/Glycated Human Serum Albumins and Aptamer-Saturated Graphene Quantum Dot: A Simulation Study | Sittiwanichai S., Sittiwanichai S., Archapraditkul C., Japrung D., Shigeta Y., Mori T., Pongprayoon P. | 2024 | Biochemistry
| 1 |
| 41 | Structural and dynamic properties of urinary human serum albumin fragments: a molecular dynamics study | Archapraditkul C., Janon K., Japrung D., Pongprayoon P. | 2023 | Journal of Biomolecular Structure and Dynamics
| 1 |
| 42 | The antioxidant activities and inhibitory effects on α-glucosidase and α-Amylase of ethanolic and aqueous extracts from various parts of Thai Caesalpinia sappan L. | Boonmee A., Moonrungsee N., Kasemsuk T., Puckdee W., Komonpanich P., Kunsook C., Khamchatra N.M., Nakeim S., Khamchutra A., Suninthaboonrana R., Chairatana P., Toviwek B., Pongprayoon P., Suwancharoen S. | 2023 | ScienceAsia
49,pp. 618-626 | 1 |
| 43 | Molecular dynamics simulations of human α-defensin 5 (HD5) crossing gram-negative bacterial membrane | Awang T., Chairatana P., Pongprayoon P. | 2023 | PLoS ONE
18(11 November) | 0 |
| 44 | How ractopamine binds to bovine serum albumin at the drug site 1 | Janoon K., Kuntip N., Niramitranon J., Pongprayoon P. | 2023 | Molecular Simulation
| 0 |
| 45 | How a mixture of microRNA-29a (miR-29a) and microRNA-144 (miR-144) cancer biomarkers interacts with a graphene quantum dot | Traiphothon D., Awang T., Kuntip N., Japrung D., Pongprayoon P. | 2025 | Journal of Molecular Graphics and Modelling
134 | 0 |
| 46 | Why Bestatin Prefers Human Carnosinase 2 (CN2) to Human Carnosinase 1 (CN1) | Toviwek B., Koonawootrittriron S., Suwanasopee T., Jattawa D., Pongprayoon P. | 2024 | Journal of Physical Chemistry B
| 0 |
| 47 | EFFECTS OF MOLECULAR CHAIN COVERAGE AND MOLECULAR CHAIN LENGTH ON STRENGTH AND PACKING OF SURFACE COATING MATERIALS: DFT CALCULATIONS | Khongpracha P., Pongprayoon P., Prasittichai C., Nokbin S. | 2024 | Suranaree Journal of Science and Technology
31(5),pp. 1-8 | 0 |
| 48 | Exploring the Capabilities of Nanosized Graphene Oxide as a Pesticide Nanosorbent: Simulation Studies | Tadawattana P., Kawashima K., Sittiwanichai S., T-Thienprasert J., Mori T., Pongprayoon P. | 2025 | ACS Omega
| 0 |
| 49 | The binding modes of brazilin and hematein from Caesalpinia sappan L. to Cutibacterium acnes lipase: Simulation studies | Pengsawang M., Toviwek B., Sangthong W., Boonmee A., Chairatana P., Pongprayoon P. | 2025 | PLoS ONE
20(3 March) | 0 |
| 50 | Comparative studies of structure and dynamics of caprine, leporine, ovine, and equine serum albumins | Pongprayoon P., Kuntip N., Suwanasopee T., Jattawa D., Niramitranon J., Japrung D., Koonawootrittriron S. | 2023 | Journal of Biomolecular Structure and Dynamics
| 0 |
| 51 | What make malarial adenosine deaminase from PLASMODIUM VIVAX recognise adenosine and 5′-methylthioadenosine: simulation studies | Chotpatiwetchkul W., Sittiwanichai S., Niramitranon J., Pongprayoon P. | 2021 | Journal of Biomolecular Structure and Dynamics
| 0 |
| 52 | Molecular insights into the adsorption mechanism of E21R and T7E21R human defensin 5 on a bacterial membrane | Chumponanomakun P., Niramitranon J., Chairatana P., Pongprayoon P. | 2022 | Molecular Simulation
| 0 |
| 53 | Revealing mechanical strength of Nanopores using atomic finite element techniques | Pongprayoon P., Chaimanatsakun A. | 2018 | Materials Science Forum
934 MSF,pp. 24-29 | 0 |