Person Image

    Education

    • Ph.D.(Bioscience), Chalmers University of Technology, SWEDEN, 2552
    • วท.ม.( ชีวสารสนเทศ), มหาวิทยาลัยเทคโนโลยีพระจอมเกล้าธนบุรี, ไทย
    • วท.บ.( เทคโนโลยีชีวภาพ), มหาวิทยาลัยมหิดล , ไทย

    Expertise Cloud

    3-methylcrotonyl-CoA carboxylaseAcheta domesticusadultAnimal nutritionAntioxidant activityArticleAspergillus oryzaeAtopic dermatitisBacteriabacterial virulenceBioactivityBioinformaticsBiomassbiosynthesisbroody behaviorcarbohydrateCarbon sourcesComparative genomicscomputational thinking skillscontrolled studycopra meal hydrolysateCordycepinCordycepsCordyceps militarisduckEntomopathogenic fungiEquine melanocytic neoplasmfemalefermentationGastrointestinal MicrobiomeGenetic engineeringgeneticsGenome-scale metabolic modelGenome-scale metabolic networkglucoseGlycosylationGut microbiotahigh performance liquid chromatographyhomology modelinghumanhuman gut microbiomeHumansIn vitro digestibilityintestine floralightLimosilactobacillus fermentum KUB-D18Limosilactobacillus reuteriLimosilactobacillus reuteri KUB-AC5Lipidlipid metabolismMetabolic functionsMetabolic modelMetabolic responsesMetabolismMetabolomicsmetaproteomicsmicrobial lipidsmicrobiologymolecular dynamics simulationMolecular Dynamics SimulationsMolecular geneticsMolecular modelingMolecular RecognitionMolecular toolboxesMolecular TransportationmonosaccharideMorchella esculentaMorchella esculenta extractMorchellum esculentaMucor circinelloidesmycobiomenonhumanNutrientsNutritionOleaginous speciesprobioticsprotein p53real time polymerase chain reactionreporter metaboliteRhodotorulaSalmonellaSalmonella EnteritidisSenior high schoolshort-chain fatty acidsSynthetic biologySystems Biologytoll like receptor 4Transcription factorTranscriptometranscriptome analysistumor necrosis factorunclassified drugจิ้งหรีดทองแดงลายจีโนมเชิงหน้าที่จุลินทรีย์ในลำไส้ชีววิทยาสังเคราะห์ชีวสารสนเทศถั่งเช่าสีทองโภชนศาสตร์สัตว์หิ่งห้อย

    Interest

    Bioinformatics, Systems Biology, Bioinformatics, Systems Biology in Microorganism

    Administrative Profile

    • ก.ค. 2567 - ปัจจุบัน คณบดี (ผู้รักษาการแทน) วิทยาลัยนานาชาติ
    • เม.ย. 2565 - เม.ย. 2567 รองผู้อำนวยการ โครงการจัดตั้งวิทยาลัยนานาชาติ มหาวิทยาลัยเกษตรศาสตร์
    • มี.ค. 2565 - ก.ค. 2567 ผู้ช่วยอธิการบดี มหาวิทยาลัยเกษตรศาสตร์
    • ก.ย. 2564 - มี.ค. 2565 ผู้ช่วยอธิการบดีฝ่ายวิจัยและสร้างสรรค์ มหาวิทยาลัยเกษตรศาสตร์

    Resource

    • จำนวนหน่วยปฏิบัติการที่เข้าร่วม 0 หน่วย
    • จำนวนเครื่องมือวิจัย 0 ชิ้น

    งานวิจัยในรอบ 5 ปี

    Project

    งานวิจัยที่อยู่ระหว่างการดำเนินการ
    • ทุนใน 8 โครงการ (หัวหน้าโครงการ 4 โครงการ, ผู้ร่วมวิจัย 4 โครงการ)
    • ทุนนอก 0 โครงการ
    งานวิจัยที่เสร็จสิ้นแล้ว
    • ทุนใน 20 โครงการ (หัวหน้าโครงการ 7 โครงการ, ที่ปรึกษาโครงการ 3 โครงการ, ผู้ร่วมวิจัย 10 โครงการ)
    • ทุนนอก 10 โครงการ (หัวหน้าโครงการ 6 โครงการ, ผู้ร่วมวิจัย 4 โครงการ)

    แนวโน้มผลงานทั้งหมดเทียบกับแนวโน้มผลงานในรอบ 5 ปี

    Output

    • บทความ 89 เรื่อง (ตีพิมพ์ในวารสารวิชาการ 79 เรื่อง, นำเสนอในการประชุม/สัมมนา 10 เรื่อง)
    • ทรัพย์สินทางปัญญา 2 เรื่อง (ลิขสิทธิ์ 0 เรื่อง, เครื่องหมายการค้า 0 เรื่อง, อนุสิทธิบัตร 2 เรื่อง, สิทธิบัตร 0 เรื่อง)
    • สิ่งประดิษฐ์ 0 เรื่อง (ขึ้นทะเบียนพันธุ์พืช หรือพันธุ์สัตว์ หรือสิ่งประดิษฐ์ มก. 0 เรื่อง)
    • Unknown 0 เรื่อง (Unknown 0 เรื่อง)

    แนวโน้มการนำผลงานไปใช้ประโยชน์ในด้านต่างๆ

    Outcome

    • การนำผลงานไปใช้ประโยชน์ 8 เรื่อง (เชิงวิชาการ 8 เรื่อง, เชิงนโยบาย/บริหาร 0 เรื่อง, เชิงสาธารณะ 0 เรื่อง, เชิงพาณิชย์ 0 เรื่อง)

    รางวัลที่ได้รับ

    Award

    • รางวัลที่ได้รับ 0 เรื่อง (ประกาศเกียรติคุณ/รางวัลนักวิจัย 0 เรื่อง, รางวัลผลงานวิจัย/สิ่งประดิษฐ์ 0 เรื่อง, รางวัลผลงานนำเสนอในการประชุมวิชาการ 0 เรื่อง)

    นักวิจัยที่มีผลงานงานร่วมกันมากที่สุด 10 คนแรก


    Scopus h-index

    #Document titleAuthorsYearSourceCited by
    1The RAVEN Toolbox and Its Use for Generating a Genome-scale Metabolic Model for Penicillium chrysogenumAgren R., Liu L., Shoaie S., Vongsangnak W., Nookaew I., Nielsen J.2013PLoS Computational Biology,
    9(3), e1002980
    319
    2De novo sequencing, assembly and analysis of the genome of the laboratory strain Saccharomyces cerevisiae CEN.PK113-7D, a model for modern industrial biotechnologyNijkamp J.F., Nijkamp J.F., van den Broek M., van den Broek M., Datema E., Datema E., Datema E., de Kok S., de Kok S., de Kok S., Bosman L., Bosman L., Luttik M.A., Luttik M.A., Daran-Lapujade P., Daran-Lapujade P., Vongsangnak W., Vongsangnak W., Nielsen J., Heijne W.H.M., Klaassen P., Paddon C.J., Platt D., Kötter P., van Ham R.C., van Ham R.C., van Ham R.C., Reinders M.J.T., Reinders M.J.T., Reinders M.J.T., Pronk J.T., Pronk J.T., de Ridder D., de Ridder D., de Ridder D., de Ridder D., Daran J.M., Daran J.M., Daran J.M.2012Microbial Cell Factories,
    11, 36
    221
    3Biomedical text mining and its applications in cancer researchZhu F., Patumcharoenpol P., Zhang C., Yang Y., Chan J., Meechai A., Vongsangnak W., Shen B., Shen B.2013Journal of Biomedical Informatics,
    46(2), pp. 200-211
    199
    4Unravelling evolutionary strategies of yeast for improving galactose utilization through integrated systems level analysisHong K., Hong K., Vongsangnak W., Vongsangnak W., Vemuri G., Nielsen J., Nielsen J.2011Proceedings of the National Academy of Sciences of the United States of America,
    108(29), pp. 12179-12184
    137
    5Performance comparison and evaluation of software tools for microRNA deep-sequencing data analysisLi Y., Zhang Z., Liu F., Vongsangnak W., Jing Q., Jing Q., Shen B.2012Nucleic Acids Research,
    40(10), pp. 4298-4305
    128
    6Towards efficient extraction of notoginseng saponins from cultured cells of Panax notoginsengVongsangnak W., Vongsangnak W., Gua J., Chauvatcharin S., Zhong J.J.2004Biochemical Engineering Journal,
    18(2), pp. 115-120
    106
    7A trispecies Aspergillus microarray: Comparative transcriptomics of three Aspergillus speciesAndersen M., Vongsangnak W., Panagiotou G., Salazar M., Lehmann L., Nielsen J.2008Proceedings of the National Academy of Sciences of the United States of America,
    105(11), pp. 4387-4392
    104
    8BioMet Toolbox: Genome-wide analysis of metabolismCvijovic M., Olivares-Hernandez R., Agren R., Dahr N., Vongsangnak W., Nookaew I., Patil K., Nielsen J.2010Nucleic Acids Research,
    38(SUPPL. 2), gkq404
    90
    9Improved annotation through genome-scale metabolic modeling of Aspergillus oryzaeVongsangnak W., Vongsangnak W., Olsen P., Hansen K., Krogsgaard S., Nielsen J., Nielsen J.2008BMC Genomics,
    9, 245
    76
    10Whole genome sequencing of Saccharomyces cerevisiae: From genotype to phenotype for improved metabolic engineering applicationsOtero J., Otero J., Otero J., Vongsangnak W., Vongsangnak W., Vongsangnak W., Asadollahi M., Asadollahi M., Asadollahi M., Olivares-Hernandes R., Olivares-Hernandes R., Maury J., Maury J., Farinelli L., Barlocher L., Østerås M., Schalk M., Clark A., Nielsen J., Nielsen J.2010BMC Genomics,
    11(1), 723
    65
    11Heterologous production of polyunsaturated fatty acids in Saccharomyces cerevisiae causes a global transcriptional response resulting in reduced proteasomal activity and increased oxidative stressRuenwai R., Neiss A., Laoteng K., Vongsangnak W., Dalfard A.B., Dalfard A.B., Cheevadhanarak S., Petranovic D., Nielsen J.2011Biotechnology Journal,
    6(3), pp. 343-356
    51
    12Optimizing cultivation of Cordyceps militaris for fast growth and cordycepin overproduction using rational design of synthetic mediaRaethong N., Wang H., Wang H., Nielsen J., Nielsen J., Vongsangnak W., Vongsangnak W.2020Computational and Structural Biotechnology Journal,
    18, pp. 1-8
    51
    13Evaluation and comparison of multiple aligners for next-generation sequencing data analysisShang J., Shang J., Zhu F., Vongsangnak W., Tang Y., Zhang W., Shen B.2014BioMed Research International,
    2014, 309650
    48
    14Genome-scale metabolic network of Cordyceps militaris useful for comparative analysis of entomopathogenic fungiVongsangnak W., Raethong N., Mujchariyakul W., Nguyen N., Leong H., Laoteng K.2017Gene,
    626, pp. 132-139
    46
    15Protective effect of lactobacillus reuteri KUB-AC5 against salmonella enteritidis challenge in chickensNakphaichit M., Sobanbua S., Siemuang S., Vongsangnak W., Nakayama J., Nitisinprasert S.2019Beneficial Microbes,
    10(1), pp. 43-54
    41
    16Uncovering global metabolic response to cordycepin production in Cordyceps militaris through transcriptome and genome-scale network-driven analysisRaethong N., Laoteng K., Vongsangnak W.2018Scientific Reports,
    8(1), 9250
    40
    17Genome-scale analysis of the metabolic networks of oleaginous Zygomycete fungiVongsangnak W., Ruenwai R., Tang X., Hu X., Zhang H., Shen B., Song Y., Laoteng K.2013Gene,
    521(1), pp. 180-190
    39
    18Alternative metabolic routes in channeling xylose to cordycepin production of Cordyceps militaris identified by comparative transcriptome analysisWongsa B., Raethong N., Chumnanpuen P., Wong-ekkabut J., Laoteng K., Vongsangnak W.2020Genomics,
    112(1), pp. 629-636
    38
    19Increased Lipid Accumulation in Mucor circinelloides by Overexpression of Mitochondrial Citrate Transporter GenesYang J., Li S., Kabir Khan M., Garre V., Vongsangnak W., Song Y.2019Industrial and Engineering Chemistry Research,
    58(6), pp. 2125-2134
    38
    20Impacts of killing process on the nutrient content, product stability and in vitro digestibility of black soldier fly (Hermetia illucens) larvae mealsZhen Y., Chundang P., Zhang Y., Wang M., Vongsangnak W., Pruksakorn C., Kovitvadhi A.2020Applied Sciences (Switzerland),
    10(17), 6099
    36
    21Uncovering transcriptional regulation of glycerol metabolism in Aspergilli through genome-wide gene expression data analysisSalazar M., Vongsangnak W., Panagiotou G., Andersen M., Nielsen J.2009Molecular Genetics and Genomics,
    282(6), pp. 571-586
    35
    22Genome-wide analysis of maltose utilization and regulation in aspergilliVongsangnak W., Salazar M., Hansen K., Nielsen J.2009Microbiology,
    155(12), pp. 3893-3902
    33
    23Revealing the beneficial effect of protease supplementation to high gravity beer fermentations using "-omics" techniquesPiddocke M., Fazio A., Vongsangnak W., Vongsangnak W., Wong M., Heldt-Hansen H., Workman C., Nielsen J., Olsson L., Olsson L.2011Microbial Cell Factories,
    10, 27
    30
    24Molecular mechanism of Forkhead box M1 inhibition by thiostrepton in breast cancer cellsKongsema M., Kongsema M., Wongkhieo S., Khongkow M., Lam E., Boonnoy P., Boonnoy P., Vongsangnak W., Wong-Ekkabut J., Wong-Ekkabut J.2019Oncology Reports,
    42(3), pp. 953-962
    28
    25Informatics for metabolomicsKusonmano K., Vongsangnak W., Chumnanpuen P.2016Advances in Experimental Medicine and Biology,
    939, pp. 91-115
    28
    26Genome-scale metabolic modeling of Mucor circinelloides and comparative analysis with other oleaginous speciesVongsangnak W., Vongsangnak W., Klanchui A., Tawornsamretkit I., Tatiyaborwornchai W., Laoteng K., Meechai A.2016Gene,
    583(2), pp. 121-129
    28
    27Annotation and analysis of malic enzyme genes encoding for multiple isoforms in the fungus Mucor circinelloides CBS 277.49Vongsangnak W., Zhang Y., Chen W., Ratledge C., Ratledge C., Song Y.2012Biotechnology Letters,
    34(5), pp. 941-947
    26
    28Its2 sequencing and targeted meta-proteomics of infant gut mycobiome reveal the functional role of rhodotorula sp. During atopic dermatitis manifestationMok K., Suratanon N., Roytrakul S., Charoenlappanit S., Patumcharoenpol P., Chatchatee P., Vongsangnak W., Nakphaichit M.2021Journal of Fungi,
    7(9), 748
    25
    29Integrative analysis reveals disease-associated genes and biomarkers for prostate cancer progressionLi Y., Vongsangnak W., Chen L., Shen B.2014BMC Medical Genomics,
    7(SUPPL.1), S3
    22
    30Metabolic responses of carotenoid and cordycepin biosynthetic pathways in cordyceps militaris under light-programming exposure through genome-wide transcriptional analysisThananusak R., Laoteng K., Raethong N., Zhang Y., Vongsangnak W.2020Biology,
    9(9), pp. 1-14, 242
    20
    31Genome-scale metabolic representation of Amycolatopsis balhimycinaVongsangnak W., Vongsangnak W., Vongsangnak W., Figueiredo L., Figueiredo L., Figueiredo L., Förster J., Weber T., Thykaer J., Stegmann E., Wohlleben W., Nielsen J., Nielsen J.2012Biotechnology and Bioengineering,
    109(7), pp. 1798-1807
    20
    32Time course gene expression profiling of yeast spore germination reveals a network of transcription factors orchestrating the global responseGeijer C., Pirkov I., Vongsangnak W., Vongsangnak W., Ericsson A., Nielsen J., Krantz M., Krantz M., Hohmann S.2012BMC Genomics,
    13(1), 554
    18
    33Post genome-wide association studies functional characterization of prostate cancer risk lociJiang J., Cui W., Vongsangnak W., Hu G., Shen B.2013BMC Genomics,
    14(SUPP 8), S9
    17
    34Analysis of the infant gut microbiome reveals metabolic functional roles associated with healthy infants and infants with atopic dermatitis using metaproteomicsKingkaw A., Nakphaichit M., Suratannon N., Nitisinprasert S., Wongoutong C., Chatchatee P., Krobthong S., Charoenlappanit S., Roytrakul S., Vongsangnak W.2020PeerJ,
    8, e9988
    17
    35Dissecting metabolic behavior of lipid over-producing strain of Mucor circinelloides through genome-scale metabolic network and multi-level data integrationVongsangnak W., Kingkaw A., Yang J., Song Y., Laoteng K.2018Gene,
    670, pp. 87-97
    17
    36Transcriptome Landscapes of Salt-Susceptible Rice Cultivar IR29 Associated with a Plant Growth Promoting Endophytic StreptomycesKruasuwan W., Kruasuwan W., Kruasuwan W., Lohmaneeratana K., Munnoch J.T., Vongsangnak W., Jantrasuriyarat C., Hoskisson P.A., Thamchaipenet A.2023Rice,
    16(1), 6
    17
    37Analysis of human gut microbiome: Taxonomy and metabolic functions in thai adultsRaethong N., Nakphaichit M., Suratannon N., Sathitkowitchai W., Sathitkowitchai W., Weerapakorn W., Keawsompong S., Vongsangnak W.2021Genes,
    12(3), pp. 1-13, 331
    16
    38In silicoandin vitrodesign of cordycepin encapsulation in liposomes for colon cancer treatmentKhuntawee W., Khuntawee W., Amornloetwattana R., Amornloetwattana R., Vongsangnak W., Namdee K., Yata T., Karttunen M., Wong-Ekkabut J., Wong-Ekkabut J.2021RSC Advances,
    11(15), pp. 8475-8484
    15
    39Comparative genome analysis reveals metabolic traits associated with probiotics properties in Lactobacillus reuteri KUB-AC5Jatuponwiphat T., Namrak T., Supataragul A., Nitisinprasert S., Nakphaichit M., Vongsangnak W.2019Gene Reports,
    17, 100536
    15
    40Comparisons of Prostate Cancer Inhibitors Abiraterone and TOK-001 Binding with CYP17A1 through Molecular DynamicsXiao F., Yang M., Xu Y., Vongsangnak W.2015Computational and Structural Biotechnology Journal,
    13, pp. 520-527
    15
    41Probing Carbon Utilization of Cordyceps militaris by Sugar Transportome and Protein Structural AnalysisSirithep K., Sirithep K., Xiao F., Raethong N., Zhang Y., Laoteng K., Hu G., Vongsangnak W., Vongsangnak W.2020Cells,
    9(2), 851
    15
    42Construction of Light-Responsive Gene Regulatory Network for Growth, Development and Secondary Metabolite Production in Cordyceps militarisIn-On A., Thananusak R., Ruengjitchatchawalya M., Vongsangnak W., Laomettachit T.2022Biology,
    11(1), 71
    15
    43Global Metabolic Changes by Bacillus Cyclic Lipopeptide Extracts on Stress Responses of Para Rubber LeafTunsagool P., Kruaweangmol P., Sunpapao A., Kuyyogsuy A., Jaresitthikunchai J., Roytrakul S., Vongsangnak W.2023Emerging Science Journal,
    7(3), pp. 974-990
    15
    44Chondroitin Sulfate and Its Derivatives: A Review of Microbial and Other Production MethodsAwofiranye A.E., Hudson J., Tithi A.D., Linhardt R.J., Vongsangnak W., Koffas M.A.G., Koffas M.A.G.2022Fermentation,
    8(7), 323
    14
    45Transcriptome analysis reveals candidate genes involved in luciferin metabolism in Luciola aquatilis (Coleoptera: Lampyridae)Vongsangnak W., Chumnanpuen P., Sriboonlert A.2016PeerJ,
    2016(10), e2534
    14
    46Systems biology and metabolic engineering of Arthrospira cell factoriesKlanchui A., Vorapreeda T., Vongsangnak W., Khannapho C., Cheevadhanarak S., Meechai A.2012Computational and Structural Biotechnology Journal,
    3(4), pp. e201210015, e201210015
    12
    47Protein–protein interface and disease: Perspective from biomolecular networksHu G., Xiao F., Li Y., Li Y., Vongsangnak W.2017Advances in Biochemical Engineering/Biotechnology,
    160, pp. 57-74
    12
    48Probing Genome-Scale Model Reveals Metabolic Capability and Essential Nutrients for Growth of Probiotic Limosilactobacillus reuteri KUB-AC5Namrak T., Raethong N., Raethong N., Jatuponwiphat T., Nitisinprasert S., Vongsangnak W., Nakphaichit M.2022Biology,
    11(2), 294
    11
    49Integrated analysis of the global transcriptional response to α-amylase over-production by Aspergillus oryzaeVongsangnak W., Hansen K., Nielsen J.2011Biotechnology and Bioengineering,
    108(5), pp. 1130-1139
    11
    50MetGEMs Toolbox: Metagenome-scale models as integrative toolbox for uncovering metabolic functions and routes of human gut microbiomePatumcharoenpol P., Nakphaichit M., Panagiotou G., Panagiotou G., Panagiotou G., Senavonge A., Suratannon N., Vongsangnak W.2021PLoS Computational Biology,
    17(1 December), e1008487
    10
    51Identification of potential candidate genes involved in the sex determination cascade in an aquatic firefly, Sclerotia aquatilis (Coleoptera, Lampyridae)Nguantad S., Chumnanpuen P., Thancharoen A., Vongsangnak W., Sriboonlert A.2020Genomics,
    112(3), pp. 2590-2602
    10
    52Metabolic traits specific for lipid-overproducing strain of Mucor circinelloides WJ11 identified by genome-scale modeling approachNa Ayudhya N.I., Laoteng K., Song Y., Meechai A., Vongsangnak W.2019PeerJ,
    7, 7015
    10
    53Identification of Differentially Expressed Non-coding RNA Networks With Potential Immunoregulatory Roles During Salmonella Enteritidis Infection in DucksZhang Y., Dong X., Hou L., Cao Z., Zhu G., Vongsangnak W., Xu Q., Chen G.2021Frontiers in Veterinary Science,
    8, 692501
    10
    54An integrated text mining framework for metabolic interaction network reconstructionPatumcharoenpol P., Patumcharoenpol P., Doungpan N., Meechai A., Shen B., Chan J.H., Vongsangnak W., Vongsangnak W.2016PeerJ,
    2016(3), e1811
    10
    55Cyanobacterial biofuels: Strategies and developments on network and modelingKlanchui A., Raethong N., Prommeenate P., Vongsangnak W., Meechai A.2017Advances in Biochemical Engineering/Biotechnology,
    160, pp. 75-102
    10
    56Whole genome analysis and elucidation of docosahexaenoic acid (DHA) biosynthetic pathway in Aurantiochytrium sp. SW1Prabhakaran P., Prabhakaran P., Raethong N., Nazir Y., Nazir Y., Halim H., Yang W., Vongsangnak W., Abdul Hamid A., Song Y.2022Gene,
    846, 146850
    9
    57Analyzing Predominant Bacterial Species and Potential Short-Chain Fatty Acid-Associated Metabolic Routes in Human Gut Microbiome Using Integrative MetagenomicsKingkaw A., Raethong N., Patumcharoenpol P., Suratannon N., Nakphaichit M., Keawsompong S., Roytrakul S., Vongsangnak W.2023Biology,
    12(1), 21
    9
    58The salmonella effector Hcp modulates infection response, and affects salmonella adhesion and egg contamination incidences in ducksSong L., Wu J., Weng K., Yao F., Vongsangnak W., Zhu G., Chen G., Zhang Y., Xu Q.2022Frontiers in Cellular and Infection Microbiology,
    12, 948237
    8
    59Dissecting Metabolic Regulation in Mycelial Growth and Fruiting Body Developmental Stages of Cordyceps militaris through Integrative Transcriptome AnalysisThananusak R., Laoteng K., Raethong N., Koffas M., Koffas M., Vongsangnak W.2022Biotechnology and Bioprocess Engineering7
    60Exploring Longitudinal Gut Microbiome towards Metabolic Functional Changes Associated in Atopic Dermatitis in Early ChildhoodPatumcharoenpol P., Kingkaw A., Nakphaichit M., Chatchatee P., Chatchatee P., Suratannon N., Suratannon N., Panagiotou G., Panagiotou G., Panagiotou G., Vongsangnak W.2023Biology,
    12(9), 1262
    7
    61Enhancing Genome-Scale Model by Integrative Exometabolome and Transcriptome: Unveiling Carbon Assimilation towards Sphingolipid Biosynthetic Capability of Cordyceps militarisCheawchanlertfa P., Chitcharoen S., Chitcharoen S., Raethong N., Liu Q., Chumnanpuen P., Soommat P., Song Y., Song Y., Koffas M., Laoteng K., Vongsangnak W.2022Journal of Fungi,
    8(8), 887
    7
    62Revealing holistic metabolic responses associated with lipid and docosahexaenoic acid (DHA) production in Aurantiochytrium sp. SW1Prabhakaran P., Prabhakaran P., Raethong N., Thananusak R., Nazir M.Y.M., Nazir M.Y.M., Sapkaew C., Soommat P., Kingkaw A., Hamid A.A., Vongsangnak W., Song Y.2023Biochimica et Biophysica Acta - Molecular and Cell Biology of Lipids,
    1868(5), 159306
    7
    63Reconstruction of insect hormone pathways in an aquatic firefly, Sclerotia aquatilis (Coleoptera: Lampyridae), using RNA-seqChanchay P., Vongsangnak W., Thancharoen A., Sriboonlert A.2019PeerJ,
    2019(8)
    7
    64Comparative metabolic capabilities for Micrococcus luteus NCTC 2665, the "Fleming" strain, and actinobacteriaRokem J., Vongsangnak W., Vongsangnak W., Nielsen J.2011Biotechnology and Bioengineering,
    108(11), pp. 2770-2775
    6
    65Functional genomics and systems biology of Cordyceps species for biotechnological applicationsRaethong N., Raethong N., Thananusak R., Cheawchanlertfa P., Cheawchanlertfa P., Prabhakaran P., Rattanaporn K., Laoteng K., Koffas M., Vongsangnak W.2023Current Opinion in Biotechnology,
    81, 102939
    6
    66Comparative genomics-based probiotic relevance of Limosilactobacillus fermentum KUB-D18Phujumpa P., Muangham S., Jatuponwiphat T., Koffas M., Nakphaichit M., Vongsangnak W.2022Gene,
    840, 146747
    6
    67Uncovering nutrients and energy related gene functions of black soldier fly Hermetia illucens strain KUPSukmak R., Suttinun C., Kovitvadhi U., Kovitvadhi A., Vongsangnak W.2024Gene,
    896, 148045
    6
    68Efficient de novo production of bioactive cordycepin by Aspergillus oryzae using a food-grade expression platformJeennor S., Anantayanon J., Panchanawaporn S., Chutrakul C., Vongsangnak W., Laoteng K.2023Microbial Cell Factories,
    22(1), 253
    6
    69Programmed cell death and Salmonella pathogenesis: an interactive overviewZhang Y., Zhang Y., Xu M., Guo Y., Chen L., Vongsangnak W., Xu Q., Lu L.2023Frontiers in Microbiology,
    14, 1333500
    6
    70Preliminary characterization of gut mycobiome enterotypes reveals the correlation trends between host metabolic parameter and diet: a case study in the Thai CohortMok K., Poolsawat T., Somnuk S., Wanikorn B., Patumcharoenpol P., Nitisinprasert S., Vongsangnak W., Nakphaichit M.2024Scientific Reports,
    14(1), 5805
    5
    71Follicular fluid-derived exosomal HMOX1 promotes granulosa cell ferroptosis involved in follicular atresia in geese (Anser cygnoides)Zhang Y., Jiang Y., Dong X., Luo S., Jiao G., Weng K., Bao Q., Zhang Y., Vongsangnak W., Chen G., Xu Q.2024Poultry Science,
    103(8), 103912
    5
    72Iron-associated protein interaction networks reveal the key functional modules related to survival and virulence of Pasteurella multocidaJatuponwiphat T., Chumnanpuen P., Othman S., E-kobon T., Vongsangnak W.2019Microbial Pathogenesis,
    127, pp. 257-266
    5
    73Analysis of genome-wide coexpression and coevolution of Aspergillus oryzae and Aspergillus nigerVongsangnak W., Nookaew I., Salazar M., Nielsen J.2010OMICS A Journal of Integrative Biology,
    14(2), pp. 165-175
    5
    74Systems biology methods and developments of filamentous fungi in relation to the production of food ingredientsVongsangnak W., Nielsen J.2013Microbial Production of Food Ingredients, Enzymes and Nutraceuticals,
    pp. 19-41
    5
    75Preliminary study: Proteomic profiling uncovers potential proteins for biomonitoring equine melanocytic neoplasmTesena P., Tesena P., Kingkaw A., Vongsangnak W., Pitikarn S., Phaonakrop N., Roytrakul S., Kovitvadhi A.2021Animals,
    11(7), 1913
    5
    76Integrative growth physiology and transcriptome profiling of probiotic limosilactobacillus reuteri kub-ac5Jatuponwiphat T., Namrak T., Nitisinprasert S., Nakphaichit M., Vongsangnak W.2021PeerJ,
    9, e12226
    4
    77Weighted gene co-expression network analysis identifies potential regulators in response to Salmonella Enteritidis challenge in the reproductive tract of laying ducksZHANG Y., LUO S.w., HOU L.e., GU T.t., ZHU G.q., VONGSANGNAK W., XU Q., CHEN G.h.2022Journal of Integrative Agriculture,
    21(8), pp. 2384-2398
    4
    78Translational biomedical informatics and computational systems medicineZhao Z., Zhao Z., Shen B., Lu X., Vongsangnak W.2013BioMed Research International,
    2013, 237465
    4
    79Sequence- and Structure-Based Functional Annotation and Assessment of Metabolic Transporters in Aspergillus oryzae: A Representative Case StudyRaethong N., Wong-Ekkabut J., Laoteng K., Vongsangnak W.2016BioMed Research International,
    2016, 8124636
    3
    80Dual Transcriptomic Analyses Unveil Host–Pathogen Interactions Between Salmonella enterica Serovar Enteritidis and Laying Ducks (Anas platyrhynchos)Zhang Y., Song L., Hou L., Cao Z., Vongsangnak W., Zhu G., Xu Q., Chen G.2021Frontiers in Microbiology,
    12, 705712
    3
    81Screening and identification of SipC-interacting proteins in Salmonella enteritidis using Gal4 yeast two-hybrid system in duckZhang Y., Gu T., Chen Y., Zhu G., Vongsangnak W., Xu Q., Chen G.2019PeerJ,
    2019(9), e7663
    3
    82Light-Exposed Metabolic Responses of Cordyceps militaris through Transcriptome-Integrated Genome-Scale ModelingSoommat P., Raethong N., Ruengsang R., Thananusak R., Laomettachit T., Laoteng K., Saithong T., Vongsangnak W.2024Biology,
    13(3), 139
    3
    83Uncovering global lipid accumulation routes towards docosahexaenoic acid (DHA) production in Aurantiochytrium sp. SW1 using integrative proteomic analysisPrabhakaran P., Prabhakaran P., Nazir M.Y.M., Nazir M.Y.M., Thananusak R., Hamid A.A., Vongsangnak W., Song Y.2023Biochimica et Biophysica Acta - Molecular and Cell Biology of Lipids,
    1868(11), 159381
    2
    84Functional insight into Cordyceps militaris sugar transporters by structure modeling, network analysis and allosteric regulationLiu X., Zhang H., Zhou Z., Zhou Z., Prabhakaran P., Vongsangnak W., Hu G., Hu G., Xiao F.2023Physical Chemistry Chemical Physics2
    85Holistic transcriptional responses of Cordyceps militaris to different culture temperaturesLusakunwiwat P., Thananusak R., Nopgason R., Laoteng K., Vongsangnak W.2024Gene,
    923, 148574
    2
    86Parallel screening and cheminformatics modeling of flavonoid activated aptasensorsXiu Y., Xiu Y., Xiu Y., Zhang N., Prabhakaran P., Jang S., Yuan Q., Breneman C.M., Jung G.Y., Vongsangnak W., Koffas M.A.G., Koffas M.A.G.2022Synthetic and Systems Biotechnology,
    7(4), pp. 1148-1158
    2
    87Faecal Proteomics and Functional Analysis of Equine Melanocytic Neoplasm in Grey HorsesTesena P., Tesena P., Kingkaw A., Phaonakrop N., Roytrakul S., Limudomporn P., Vongsangnak W., Kovitvadhi A.2022Veterinary Sciences,
    9(2), 94
    2
    88In silico analysis of mucor circinelloides genome-scale model for enhancing lipid productionKlanchui A., Vongsangnak W., Laoteng K., Meechai A.2016ACM International Conference Proceeding Series,
    pp. 14-18
    2
    89Bibliome mining platform and application for building metabolic interaction networkPatumcharoenpol P., Patumcharoenpol P., Chan J., Meechai A., Shen B., Vongsangnak W.2012Procedia Computer Science,
    11, pp. 55-62
    2
    90Comparative gene clusters analysis of Cordyceps militaris and related entomopathogenic fungiVongsangnak W., Mujchariyakul W., Wizaza C., Patumcharoenpol P., Kittichotirat W.2018ACM International Conference Proceeding Series1
    91Gut microbiome and serum metabolome analyses identify Bacteroides fragilis as regulators of serotonin content and PRL secretion in broody geeseZhang Y., Zhou N., Wu J., Song L., Bao Q., Weng K., Zhang Y., Vongsangnak W., Chen G., Xu Q.2024Journal of Integrative Agriculture,
    23(6), pp. 2033-2051
    1
    92The development of molecular genetics concept test for senior high school students using Rasch analysisSari I.J., Sari I.J., Pongsophon P., Vongsangnak W., Pimthong P., Pitiporntapin S.2022International Journal of Evaluation and Research in Education,
    11(4), pp. 1687-1695
    1
    93Dissecting Holistic Metabolic Acclimatization of Mucor circinelloides WJ11 Defective in Carotenoid BiosynthesisLi F., Li F., Thananusak R., Raethong N., Yang J., Wei M., Zhao X., Laoteng K., Song Y., Vongsangnak W.2024Biology,
    13(4), 276
    1
    94Expanded Gene Regulatory Network Reveals Potential Light-Responsive Transcription Factors and Target Genes in Cordyceps militarisBuradam P., Thananusak R., Koffas M., Koffas M., Chumnanpuen P., Vongsangnak W.2024International Journal of Molecular Sciences,
    25(19), 10516
    0
    95Lipid Metabolism in Fungal Growth and DevelopmentAntimanon S., Wannawilai S., Vorapreeda T., Vongsangnak W., Laoteng K.2023Fungal Lipid Biochemistry,
    pp. 309-338
    0
    96Exploring Protein Functions of Gut Bacteriome and Mycobiome in Thai Infants Associated with Atopic Dermatitis Through Metaproteomic and Host Interaction AnalysisChantanaskul T., Patumcharoenpol P., Roytrakul S., Kingkaw A., Vongsangnak W.2024International Journal of Molecular Sciences,
    25(24), 13533
    0
    97Phosphorylation of SNW1 protein associated with equine melanocytic neoplasm identified in serum and fecesVinijkumthorn R., Kingkaw A., Yanyongsirikarn P., Phaonakrop N., Roytrakul S., Vongsangnak W., Tesena P.2024Scientific Reports,
    14(1), 30842
    0
    98Quantitative Proteomics Analysis Reveals XDH Related with Ovarian Oxidative Stress Involved in Broodiness of GeeseZhou N., Zhou N., Zhang Y., Zhang Y., Jiang Y., Jiang Y., Gu W., Gu W., Zhao S., Vongsangnak W., Zhang Y., Zhang Y., Xu Q., Xu Q., Zhang Y., Zhang Y.2025Animals,
    15(2), 182
    0
    99Exploring the functional diversity and metabolic activities of the human gut microbiome in Thai adults in response to a prebiotic dietKingkaw A., Patumcharoenpol P., Suratannon N., Nakphaichit M., Roytrakul S., Vongsangnak W.2025Microbiology Spectrum,
    13(2)
    0
    100Comparative Transcriptomic Responses Directed Towards Reporter Metabolic Routes of Mucor circinelloides WJ11 for Growth Adaptation and Lipid OverproductionLi F., Li F., Htwe N.M.P.S., Patumcharoenpol P., Yang J., Laoteng K., Song Y., Song Y., Vongsangnak W.2025Fermentation,
    11(2), 61
    0
    101Dissecting Metabolic Functions and Sugar Transporters Using Genome and Transportome of Probiotic Limosilactobacillus fermentum KUB-D18He Y., Mok K., Chumnanpuen P., Nakphaichit M., Vongsangnak W.2025Genes,
    16(3), 348
    0
    102Synbiotic-driven modulation of the gut microbiota and metabolic functions related to obesity: insights from a human gastrointestinal modelMok K., Tomtong P., Ogawa T., Nagai K., Torrungruang P., Charoensiddhi S., Nakayama J., Wanikorn B., Nitisinprasert S., Vongsangnak W., Nakphaichit M.2025BMC Microbiology,
    25(1), 250
    0
    103Exploring Morchella esculenta polysaccharide extracts: In vitro digestion, fermentation characteristics, and prebiotic potential for modulating gut microbiota and functionLiu B., Tomtong P., Charoensiddhi S., Vongsangnak W.2025International Journal of Biological Macromolecules,
    318, 144910
    0
    104In silico analysis of plant and animal transposable elementsHuang M.L., Wattanachaisaereekul S., Han Y.J., Vongsangnak W.2014International Journal of Bioinformatics Research and Applications,
    10(3), pp. 297-306
    0
    105Preface to selected papers from the 6th International Conference on Computational Systems-Biology and Bioinformatics (CSBio2015)Kittichotirat W., Engchuan W., Vongsangnak W., Meechai A.2016Journal of Bioinformatics and Computational Biology,
    14(1), 1602001
    0